VTK
vtkProteinRibbonFilter.h
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1/*=========================================================================
2
3 Program: Visualization Toolkit
4 Module: vtkProteinRibbonFilter.h
5
6 Copyright (c) Ken Martin, Will Schroeder, Bill Lorensen
7 All rights reserved.
8 See Copyright.txt or http://www.kitware.com/Copyright.htm for details.
9
10 This software is distributed WITHOUT ANY WARRANTY; without even
11 the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
12 PURPOSE. See the above copyright notice for more information.
13
14=========================================================================*/
15
16#ifndef vtkProteinRibbonFilter_h
17#define vtkProteinRibbonFilter_h
18
30#include "vtkDomainsChemistryModule.h" // for export macro
32
33#include "vtkColor.h" // For vtkColor3ub.
34#include <map> // For element to color map.
35
36class vtkVector3f;
37class vtkStringArray;
38
39class VTKDOMAINSCHEMISTRY_EXPORT vtkProteinRibbonFilter
41{
42public:
44 void PrintSelf(ostream& os, vtkIndent indent);
45
47
49
52 vtkGetMacro(CoilWidth, float);
53 vtkSetMacro(CoilWidth, float);
55
57
60 vtkGetMacro(HelixWidth, float);
61 vtkSetMacro(HelixWidth, float);
63
65
68 vtkGetMacro(SubdivideFactor, int);
69 vtkSetMacro(SubdivideFactor, int);
71
73
76 vtkGetMacro(DrawSmallMoleculesAsSpheres, bool);
77 vtkSetMacro(DrawSmallMoleculesAsSpheres, bool);
79
81
84 vtkGetMacro(SphereResolution, int);
85 vtkSetMacro(SphereResolution, int);
87
88protected:
91
92 int FillInputPortInformation(int, vtkInformation*);
93
94 int RequestData(vtkInformation *,
97
98 void CreateThinStrip(vtkPolyData* poly, vtkUnsignedCharArray *pointsColors,
99 vtkPoints* p, std::vector<std::pair<vtkVector3f, bool> >& p1,
100 std::vector<std::pair<vtkVector3f, bool> >& p2,
101 std::vector<vtkColor3ub> &colors);
102
103 void CreateAtomAsSphere(vtkPolyData* poly, vtkUnsignedCharArray *pointsColors,
104 double *pos, const vtkColor3ub& color, float radius,
105 float scale);
106
107 static std::vector<vtkVector3f>* Subdivide(std::vector<std::pair<vtkVector3f, bool> >& p,
108 int div);
109
110 void SetColorByAtom(std::vector<vtkColor3ub>& colors, vtkStringArray* atomTypes);
111
112 void SetColorByStructure(std::vector<vtkColor3ub>& colors,
113 vtkStringArray* atomTypes, vtkUnsignedCharArray* ss,
114 const vtkColor3ub& helixColor,
115 const vtkColor3ub& sheetColor);
116
117 std::map<std::string, vtkColor3ub> ElementColors;
118
119 float CoilWidth;
120 float HelixWidth;
121 int SphereResolution;
122 int SubdivideFactor;
123 bool DrawSmallMoleculesAsSpheres;
124
125private:
126 vtkProteinRibbonFilter(const vtkProteinRibbonFilter&) VTK_DELETE_FUNCTION;
127 void operator=(const vtkProteinRibbonFilter&) VTK_DELETE_FUNCTION;
128};
129
130#endif // vtkProteinRibbonFilter_h
Some derived classes for the different colors commonly used.
Definition: vtkColor.h:195
a simple class to control print indentation
Definition: vtkIndent.h:40
Store zero or more vtkInformation instances.
Store vtkAlgorithm input/output information.
represent and manipulate 3D points
Definition: vtkPoints.h:40
Superclass for algorithms that produce only polydata as output.
concrete dataset represents vertices, lines, polygons, and triangle strips
Definition: vtkPolyData.h:86
generates protein ribbons
a vtkAbstractArray subclass for strings
dynamic, self-adjusting array of unsigned char
@ vector
Definition: vtkX3D.h:237
@ scale
Definition: vtkX3D.h:229
@ color
Definition: vtkX3D.h:221
@ radius
Definition: vtkX3D.h:252
vtkSetMacro(IgnoreDriverBugs, bool)
Updates the extensions string.